Cre13.g573650 (At-SCL28, SCL28)

Aliases : At-SCL28, SCL28

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.SCL28/30/33 splicing factor

Gene families : OG0001193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre13.g573650

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00197p00027080	At-SCL28, SCL28,...	RNA processing.RNA splicing.spliceosome-associated...	0.02	OrthoFinder output from all 47 species
Adi_g014843	At-SCL30A, SCL30A	RNA splicing factor *(SCL28/30/33) & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0104.g044778	SCL30, At-SCL30	not classified & original description: CDS=245-904	0.02	OrthoFinder output from all 47 species
LOC_Os03g24890.1	At-SCL28, SCL28,...	SCL28/30/33 RNA splicing factor	0.01	OrthoFinder output from all 47 species
LOC_Os12g38430.1	SCL30, At-SCL30,...	SCL28/30/33 RNA splicing factor	0.02	OrthoFinder output from all 47 species
Ppi_g41827	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	22	91

External Links

No external refs found!