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  5. Cre13.g566900

Cre13.g566900


Description : DNA damage response.BRCC DNA-damage response complex.BRCA2 component


Gene families : OG0007523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007523_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g566900

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00030650 BRCA2(V),... DNA damage response.BRCC DNA-damage response... 0.04 OrthoFinder output from all 47 species
AT4G00020 EDA20,... BREAST CANCER 2 like 2A 0.04 OrthoFinder output from all 47 species
GSVIVT01030280001 BRCA2(V),... DNA damage response.BRCC DNA-damage response... 0.04 OrthoFinder output from all 47 species
Gb_10450 BRCA2(V),... DMC1-recombinase recruitment protein (BRCA2) 0.03 OrthoFinder output from all 47 species
LOC_Os01g07110.1 BRCA2(V),... DMC1-recombinase recruitment protein (BRCA2). component... 0.03 OrthoFinder output from all 47 species
Len_g08331 BRCA2(V),... component *(BRCA2) of regulatory BRCC deubiquination... 0.02 OrthoFinder output from all 47 species
MA_91494g0010 BRCA2(V),... DMC1-recombinase recruitment protein (BRCA2) 0.05 OrthoFinder output from all 47 species
Solyc02g050200.2.1 BRCA2(V),... DMC1-recombinase recruitment protein (BRCA2). component... 0.06 OrthoFinder output from all 47 species
Solyc02g050210.2.1 BRCA2(V),... DMC1-recombinase recruitment protein (BRCA2). component... 0.01 OrthoFinder output from all 47 species
Tin_g11489 BRCA2(V),... component *(BRCA2) of regulatory BRCC deubiquination... 0.02 OrthoFinder output from all 47 species
Zm00001e040528_P002 BRCA2(V),... DMC1-recombinase recruitment protein (BRCA2). component... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015187 BRCA2_OB_1 2419 2552
IPR015252 BRCA2_hlx 2359 2412
No external refs found!