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  5. Cre13.g565800

Cre13.g565800 (ATRGP1, RGP1)


Aliases : ATRGP1, RGP1

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose synthesis.UDP-L-arabinose mutase


Gene families : OG0001238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g565800

Target Alias Description ECC score Gene Family Method Actions
AT5G15650 RGP2, ATRGP2 reversibly glycosylated polypeptide 2 0.03 OrthoFinder output from all 47 species
Adi_g016169 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082268 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40610 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06621 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12775 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31603 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02782 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene57355.t1 ATRGP1, RGP1,... UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0048.g030465 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: CDS=163-1227 0.03 OrthoFinder output from all 47 species
Azfi_s0110.g045465 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: CDS=87-1109 0.02 OrthoFinder output from all 47 species
Ceric.02G101600.1 ATRGP1, RGP1,... UDP-L-arabinose mutase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g04103 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008133001 RGP3, RGP Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
Gb_21665 ATRGP1, RGP1 UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Gb_24636 RGP3, RGP UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Gb_38716 No alias UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
LOC_Os03g40270.1 RGP2, ATRGP2,... UDP-L-arabinose mutase 0.04 OrthoFinder output from all 47 species
MA_514703g0010 RGP3, RGP UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
MA_6359g0010 RGP3, RGP UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species
Mp2g10790.1 RGP3, RGP UDP-L-arabinose mutase 0.04 OrthoFinder output from all 47 species
Mp2g10800.1 ATRGP1, RGP1 UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species
Msp_g01532 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012500 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: CDS=168-1190 0.01 OrthoFinder output from all 47 species
Smo140071 ATRGP1, RGP1 Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
Smo76446 RGP2, ATRGP2 Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
Solyc02g065740.3.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Solyc03g070390.3.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.01 OrthoFinder output from all 47 species
Solyc04g005340.2.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.06 OrthoFinder output from all 47 species
Solyc04g051200.2.1 Solyc04g051200 UDP-L-arabinose mutase 0.04 OrthoFinder output from all 47 species
Tin_g40978 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006668_P001 Zm00001e006668 UDP-L-arabinose mutase 0.04 OrthoFinder output from all 47 species
Zm00001e012459_P003 RGP2, ATRGP2,... UDP-L-arabinose mutase 0.01 OrthoFinder output from all 47 species
Zm00001e035508_P001 RGP3, RGP, Zm00001e035508 UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR037595 RGP_fam 6 339
No external refs found!