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  5. Cre13.g562950

Cre13.g562950 (APC6)


Aliases : APC6

Description : Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.arc lamp subcomplex.APC6 component


Gene families : OG0005600 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005600_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g562950

Target Alias Description ECC score Gene Family Method Actions
Ceric.29G072200.1 APC6, Ceric.29G072200 component *(APC6) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
LOC_Os03g13370.1 APC6, LOC_Os03g13370 component APC6 of (APC/C)-dependent ubiquitination arc... 0.02 OrthoFinder output from all 47 species
MA_11915g0010 APC6 Anaphase-promoting complex subunit 6 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_18243g0020 APC6 component APC6 of (APC/C)-dependent ubiquitination arc... 0.03 OrthoFinder output from all 47 species
Ore_g37587 APC6 component *(APC6) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Pnu_g07844 APC6 component *(APC6) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Tin_g06652 APC6 component *(APC6) of (APC/C)-dependent ubiquiTination... 0.02 OrthoFinder output from all 47 species
Zm00001e000977_P002 APC6, Zm00001e000977 component APC6 of (APC/C)-dependent ubiquitination arc... 0.02 OrthoFinder output from all 47 species
Zm00001e038627_P004 APC6, Zm00001e038627 component APC6 of (APC/C)-dependent ubiquitination arc... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013105 TPR_2 787 816
No external refs found!