1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre12.g549852

Cre12.g549852


No description available


Gene families : OG0001091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001091_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g549852
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Adi_g013349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g64658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16391.t1 Aspi01Gene16391 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene16393.t1 Aspi01Gene16393 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene16445.t1 Aspi01Gene16445 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene57831.t1 Aspi01Gene57831 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11262 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.05G065800.1 Ceric.05G065800 not classified & original description: pacid=50578796... 0.02 OrthoFinder output from all 47 species
Ceric.23G017500.1 Ceric.23G017500 not classified & original description: pacid=50610807... 0.01 OrthoFinder output from all 47 species
Dcu_g11639 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g07370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05188 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0163.g024012 No alias not classified & original description: CDS=52-1167 0.02 OrthoFinder output from all 47 species
Spa_g00945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 9 133
IPR002347 SDR_fam 161 224
No external refs found!