1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre12.g547450

Cre12.g547450 (VPS9, ATVPS9A, VPS9A)


Aliases : VPS9, ATVPS9A, VPS9A

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.VPS9 RAB5 guanine nucleotide exchange factor


Gene families : OG0004643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004643_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g547450

Target Alias Description ECC score Gene Family Method Actions
Dde_g03335 VPS9, ATVPS9A, VPS9A RAB5 nucleotide exchange factor *(VPS9) & original... 0.01 OrthoFinder output from all 47 species
Mp7g12500.1 VPS9, ATVPS9A, VPS9A RAB5 guanine nucleotide exchange factor (VPS9) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025424 VPS9, ATVPS9A, VPS9A RAB5 nucleotide exchange factor *(VPS9) & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0030173 obsolete integral component of Golgi membrane IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR003123 VPS9 149 247
No external refs found!