Cre12.g529400


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS27 component


Gene families : OG0001813 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001813_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g529400

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00194290 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 OrthoFinder output from all 47 species
AT2G45710 No alias Zinc-binding ribosomal protein family protein 0.03 OrthoFinder output from all 47 species
AT3G61110 ARS27A, RS27A ribosomal protein S27 0.12 OrthoFinder output from all 47 species
AT5G47930 No alias Zinc-binding ribosomal protein family protein 0.12 OrthoFinder output from all 47 species
Als_g39722 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Als_g46225 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Als_g46226 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Aob_g24902 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Aop_g09346 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene01803.t1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Aspi01Gene01804.t1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Aspi01Gene36661.t1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene55503.t1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Azfi_s0004.g008655 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Azfi_s0182.g056413 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g12663 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g12664 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cba_g35394 No alias component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ceric.05G019300.1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Ceric.26G067400.1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.1 OrthoFinder output from all 47 species
Ceric.34G024800.1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001299.2 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 OrthoFinder output from all 47 species
Dac_g00043 No alias component *(eS27) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dac_g17983 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.15 OrthoFinder output from all 47 species
Dac_g40966 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g20815 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g35625 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.09 OrthoFinder output from all 47 species
Dcu_g35656 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.14 OrthoFinder output from all 47 species
Dde_g00057 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
GSVIVT01001113001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.19 OrthoFinder output from all 47 species
GSVIVT01032964001 ARS27A, RS27A Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 OrthoFinder output from all 47 species
LOC_Os04g27860.1 LOC_Os04g27860 component RPS27 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os04g32710.1 LOC_Os04g32710 component RPS27 of SSU proteome 0.05 OrthoFinder output from all 47 species
Len_g24738 No alias component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Len_g26494 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Len_g43546 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g15035 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g40961 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_54625g0010 ARS27A, RS27A component RPS27 of SSU proteome 0.08 OrthoFinder output from all 47 species
MA_87055g0010 ARS27A, RS27A component RPS27 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp5g09510.1 No alias component RPS27 of SSU proteome 0.2 OrthoFinder output from all 47 species
Pir_g63736 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pp3c1_15840V3.1 Pp3c1_15840 ribosomal protein S27 0.15 OrthoFinder output from all 47 species
Pp3c21_21540V3.1 Pp3c21_21540 ribosomal protein S27 0.01 OrthoFinder output from all 47 species
Pp3c22_18310V3.1 ARS27A, RS27A,... ribosomal protein S27 0.09 OrthoFinder output from all 47 species
Pp3c2_20540V3.1 ARS27A, RS27A,... ribosomal protein S27 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018215 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0165.g024133 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Sam_g37791 No alias component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Smo163947 ARS27A, RS27A Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 OrthoFinder output from all 47 species
Solyc01g008080.3.1 ARS27A, RS27A,... component RPS27 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc01g008090.4.1 ARS27A, RS27A,... component RPS27 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc06g068710.3.1 ARS27A, RS27A,... component RPS27 of SSU proteome 0.02 OrthoFinder output from all 47 species
Spa_g16488 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g36862 No alias component *(eS27) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Spa_g53353 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Tin_g24199 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Zm00001e024704_P001 ARS27A, RS27A,... component RPS27 of SSU proteome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
MF GO:0033218 amide binding IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27 30 84
No external refs found!