Cre12.g521150 (CDF2)

Aliases : CDF2

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g521150
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00119p00099150	CDF2,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AT1G26790	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT5G62430	CDF1	cycling DOF factor 1	0.04	OrthoFinder output from all 47 species
Adi_g007049	CDF2	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g008551	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g022624	TMO6	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g074653	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g077026	TMO6	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g20056	CDF3	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g24071	OBP4	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Als_g01888	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g22545	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g12576	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g17496	CDF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s4159.g118156	TMO6	transcription factor *(DOF) & original description: CDS=1-876	0.02	OrthoFinder output from all 47 species
Cba_g29247	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g57567	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g71501	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g22945	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g45363	CDF2	TIFY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g45064	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g05737	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g10677	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26661	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g28530	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01007992001	CDF1	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01016887001	ADOF1, DOF1	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01019969001	CDF1	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01021085001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.01	OrthoFinder output from all 47 species
Gb_07177	CDF2	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Gb_28499	TMO6	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os01g48290.1	LOC_Os01g48290	transcription factor (DOF)	0.01	OrthoFinder output from all 47 species
LOC_Os03g07360.1	CDF3, LOC_Os03g07360	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g38870.1	LOC_Os03g38870	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os10g26620.1	CDF1, LOC_Os10g26620	transcription factor (DOF)	0.01	OrthoFinder output from all 47 species
Len_g17550	CDF2	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g01645	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
MA_2430g0010	CDF3	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g11078	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g12603	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g15852	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g07392	TMO6	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g18317	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g05845	TMO6	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g42292	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g10735	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g13771	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c9_9570V3.1	PHS1, Pp3c9_9570	cytidine/deoxycytidylate deaminase family protein	0.01	OrthoFinder output from all 47 species
Ppi_g61765	DAG1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g36281	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g082840.3.1	DAG1, Solyc03g082840	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc05g007880.4.1	CDF1, Solyc05g007880	Cyclic dof factor 2 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Solyc11g066050.1.1	Solyc11g066050	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Spa_g02206	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g50770	TMO6	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Tin_g00630	TMO6	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Tin_g08597	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e004476_P002	Zm00001e004476	transcription factor (DOF)	0.01	OrthoFinder output from all 47 species
Zm00001e012824_P001	CDF1, Zm00001e012824	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e028042_P002	Zm00001e028042	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	95	151

External Links

No external refs found!

Cre12.g521150 (CDF2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation