Cre12.g520400

No description available

Gene families : OG0005986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005986_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g520400
Cluster	HCCA: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00101p00151570	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
AT2G20060	No alias	Ribosomal protein L4/L1 family	0.03	OrthoFinder output from all 47 species
LOC_Os11g37510.1	LOC_Os11g37510	component mtRPL4 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
MA_10437219g0010	No alias	component mtRPL4 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Mp4g00020.1	No alias	component mtRPL4 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Pp3c13_15330V3.1	Pp3c13_15330	Ribosomal protein L4/L1 family	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006510	No alias	component *(uL4m) of large mitoribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Solyc12g088730.2.1	Solyc12g088730	component mtRPL4 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
CC	GO:0005801	cis-Golgi network	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
MF	GO:0070569	uridylyltransferase activity	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002136	Ribosomal_L4/L1e	135	389

External Links

No external refs found!

Cre12.g520400

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation