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  5. Cre12.g518107

Cre12.g518107


Description : RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component


Gene families : OG0002733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g518107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00218290 DFR, TT3, M318,... RNA biosynthesis.RNA polymerase III-dependent... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00113670 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase III-dependent... 0.02 OrthoFinder output from all 47 species
AT1G17450 No alias B-block binding subunit of TFIIIC 0.02 OrthoFinder output from all 47 species
AT1G59460 No alias No description available 0.01 OrthoFinder output from all 47 species
Adi_g019438 No alias promotor-binding component *(TFC3) of TFIIIc... 0.02 OrthoFinder output from all 47 species
Adi_g028527 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g16052 No alias promotor-binding component *(TFC3) of TFIIIc... 0.04 OrthoFinder output from all 47 species
Aob_g34260 No alias promotor-binding component *(TFC3) of TFIIIc... 0.04 OrthoFinder output from all 47 species
Aop_g04612 No alias promotor-binding component *(TFC3) of TFIIIc... 0.03 OrthoFinder output from all 47 species
Aspi01Gene38886.t1 Aspi01Gene38886 promotor-binding component *(TFC3) of TFIIIc... 0.02 OrthoFinder output from all 47 species
Aspi01Gene38888.t1 Aspi01Gene38888 promotor-binding component *(TFC3) of TFIIIc... 0.02 OrthoFinder output from all 47 species
Dcu_g10294 No alias promotor-binding component *(TFC3) of TFIIIc... 0.01 OrthoFinder output from all 47 species
GSVIVT01016771001 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.01 OrthoFinder output from all 47 species
Gb_30476 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.04 OrthoFinder output from all 47 species
Gb_37452 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.02 OrthoFinder output from all 47 species
LOC_Os02g21190.1 LOC_Os02g21190 promotor-binding component TFC3 of TFIIIc transcription... 0.01 OrthoFinder output from all 47 species
Lfl_g18937 No alias promotor-binding component *(TFC3) of TFIIIc... 0.03 OrthoFinder output from all 47 species
MA_59941g0010 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.02 OrthoFinder output from all 47 species
MA_60759g0010 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.02 OrthoFinder output from all 47 species
Mp1g26830.1 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.03 OrthoFinder output from all 47 species
Ore_g35774 No alias promotor-binding component *(TFC3) of TFIIIc... 0.02 OrthoFinder output from all 47 species
Ppi_g15417 No alias promotor-binding component *(TFC3) of TFIIIc... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005252 No alias promotor-binding component *(TFC3) of TFIIIc... 0.01 OrthoFinder output from all 47 species
Sam_g24501 No alias promotor-binding component *(TFC3) of TFIIIc... 0.01 OrthoFinder output from all 47 species
Smo409587 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.02 OrthoFinder output from all 47 species
Solyc09g009800.3.1 Solyc09g009800 promotor-binding component TFC3 of TFIIIc transcription... 0.04 OrthoFinder output from all 47 species
Spa_g06971 No alias promotor-binding component *(TFC3) of TFIIIc... 0.02 OrthoFinder output from all 47 species
Tin_g16351 No alias promotor-binding component *(TFC3) of TFIIIc... 0.02 OrthoFinder output from all 47 species
Zm00001e015835_P001 Zm00001e015835 promotor-binding component TFC3 of TFIIIc transcription... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR007309 TFIIIC_Bblock-bd 141 211
No external refs found!