Cre12.g515850 (ATPCNA1, PCNA1)

Aliases : ATPCNA1, PCNA1

Description : Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp protein

Gene families : OG0002250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002250_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g515850

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00259890	ATPCNA1, PCNA1,...	Cell cycle.interphase.DNA...	0.04	OrthoFinder output from all 47 species
AMTR_s00029p00198200	ATPCNA1, PCNA1,...	Cell cycle.interphase.DNA...	0.04	OrthoFinder output from all 47 species
AT1G07370	ATPCNA1, PCNA1	proliferating cellular nuclear antigen 1	0.03	OrthoFinder output from all 47 species
Adi_g033077	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g00737	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.01	OrthoFinder output from all 47 species
Als_g07143	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g50349	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g20041	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g09705	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.21G042200.1	ATPCNA1, PCNA1,...	sliding clamp protein *(PCNA) & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.27G045300.1	ATPCNA1, PCNA1,...	sliding clamp protein *(PCNA) & original description:...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020553.141	ATPCNA1, PCNA1	Cell cycle.interphase.DNA...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021319.67	ATPCNA1, PCNA1	Cell cycle.interphase.DNA...	0.06	OrthoFinder output from all 47 species
Dac_g03057	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.09	OrthoFinder output from all 47 species
Dac_g31775	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g40322	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g43007	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01024815001	PCNA2, ATPCNA2	Cell cycle.interphase.DNA...	0.05	OrthoFinder output from all 47 species
Gb_07434	ATPCNA1, PCNA1	sliding clamp protein (PCNA)	0.02	OrthoFinder output from all 47 species
Gb_11143	ATPCNA1, PCNA1	sliding clamp protein (PCNA)	0.08	OrthoFinder output from all 47 species
LOC_Os02g56130.1	PCNA2, ATPCNA2,...	sliding clamp protein (PCNA)	0.05	OrthoFinder output from all 47 species
Len_g11664	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.04	OrthoFinder output from all 47 species
MA_83835g0010	ATPCNA1, PCNA1	sliding clamp protein (PCNA)	0.07	OrthoFinder output from all 47 species
Mp2g02690.1	PCNA2, ATPCNA2	sliding clamp protein (PCNA)	0.02	OrthoFinder output from all 47 species
Msp_g09130	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g12815	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c4_11630V3.1	ATPCNA1, PCNA1,...	proliferating cellular nuclear antigen 1	0.03	OrthoFinder output from all 47 species
Ppi_g04268	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g26451	No alias	sliding clamp protein *(PCNA) & original description: none	0.06	OrthoFinder output from all 47 species
Solyc06g076660.3.1	PCNA2, ATPCNA2,...	sliding clamp protein (PCNA)	0.05	OrthoFinder output from all 47 species
Spa_g12144	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.16	OrthoFinder output from all 47 species
Spa_g12145	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g47454	PCNA2, ATPCNA2	sliding clamp protein *(PCNA) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g51877	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.16	OrthoFinder output from all 47 species
Tin_g04951	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g12734	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.09	OrthoFinder output from all 47 species
Zm00001e016159_P001	PCNA2, ATPCNA2,...	sliding clamp protein (PCNA)	0.07	OrthoFinder output from all 47 species
Zm00001e023660_P001	PCNA2, ATPCNA2,...	sliding clamp protein (PCNA)	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006275	regulation of DNA replication	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
CC	GO:0005815	microtubule organizing center	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	HCCA
MF	GO:0019207	kinase regulator activity	IEP	HCCA
MF	GO:0019887	protein kinase regulator activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
BP	GO:0034453	microtubule anchoring	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022648	Pr_cel_nuc_antig_N	1	123
IPR022649	Pr_cel_nuc_antig_C	127	254

External Links

No external refs found!

Cre12.g515850 (ATPCNA1, PCNA1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation