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  5. Cre12.g515250

Cre12.g515250


Description : Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana


Gene families : OG0003462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g515250

Target Alias Description ECC score Gene Family Method Actions
AT3G28430 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Aev_g39003 No alias membrane trafficking factor *(GFS9) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g32639 No alias membrane trafficking factor *(GFS9) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34035 No alias membrane trafficking factor *(GFS9) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene06204.t1 Aspi01Gene06204 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene42411.t1 Aspi01Gene42411 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0015.g014134 No alias membrane trafficking factor *(GFS9) & original... 0.02 OrthoFinder output from all 47 species
Ceric.1Z252700.1 Ceric.1Z252700 membrane trafficking factor *(GFS9) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01968 No alias membrane trafficking factor *(GFS9) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029303001 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033943001 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_04682 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g23210.1 LOC_Os04g23210 Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Len_g08189 No alias membrane trafficking factor *(GFS9) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11932 No alias membrane trafficking factor *(GFS9) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10435655g0010 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g05320.1 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ppi_g31204 No alias membrane trafficking factor *(GFS9) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18673 No alias membrane trafficking factor *(GFS9) & original description: none 0.02 OrthoFinder output from all 47 species
Smo405955 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Tin_g11706 No alias membrane trafficking factor *(GFS9) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e040667_P003 Zm00001e040667 Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR019155 CLEC16A/TT9_N 55 206
No external refs found!