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  5. Cre12.g513600

Cre12.g513600 (SGT1A)


Aliases : SGT1A

Description : External stimuli response.biotic stress.pathogen effector.ETI (effector-triggered immunity) network.SGT1 co-regulator


Gene families : OG0002844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g513600
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Als_g51446 RPR1, EDM1,... effector-triggered immunity co-regulator *(SGT1) &... 0.03 OrthoFinder output from all 47 species
Aob_g05859 RPR1, EDM1,... effector-triggered immunity co-regulator *(SGT1) &... 0.02 OrthoFinder output from all 47 species
Aop_g08688 SGT1A effector-triggered immunity co-regulator *(SGT1) &... 0.03 OrthoFinder output from all 47 species
Aop_g43425 SGT1A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g53473 SGT1A effector-triggered immunity co-regulator *(SGT1) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000219.67 No alias External stimuli response.biotic stress.pathogen... 0.08 OrthoFinder output from all 47 species
Dac_g12433 SGT1A effector-triggered immunity co-regulator *(SGT1) &... 0.03 OrthoFinder output from all 47 species
Dcu_g07467 SGT1A effector-triggered immunity co-regulator *(SGT1) &... 0.01 OrthoFinder output from all 47 species
Gb_04132 SGT1A SGT1 effector-triggered immunity co-regulator 0.07 OrthoFinder output from all 47 species
MA_133206g0010 RPR1, EDM1,... SGT1 effector-triggered immunity co-regulator 0.02 OrthoFinder output from all 47 species
Mp5g04260.1 RPR1, EDM1,... SGT1 effector-triggered immunity co-regulator 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011207 SGT1A effector-triggered immunity co-regulator *(SGT1) &... 0.02 OrthoFinder output from all 47 species
Solyc03g007670.4.1 SGT1A, Solyc03g007670 SGT1 effector-triggered immunity co-regulator 0.02 OrthoFinder output from all 47 species
Zm00001e027909_P002 SGT1A, Zm00001e027909 SGT1 effector-triggered immunity co-regulator 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 71 103
IPR007699 SGS_dom 314 394
IPR007052 CS_dom 199 275
No external refs found!