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  5. LOC_Os05g01450.1

LOC_Os05g01450.1


Description : component eIF3f of eIF3 mRNA-to-PIC binding complex


Gene families : OG_01_0003782 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003782_tree ,
OG_02_0005387 (LandPlants) Phylogenetic Tree(s): OG_02_0005387_tree ,
OG_03_0006646 (SeedPlants) Phylogenetic Tree(s): OG_03_0006646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g01450.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00121720 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.07 Archaeplastida
AT2G39990 EIF2, AteIF3f, eIF3F eukaryotic translation initiation factor 2 0.04 Archaeplastida
Cpa|evm.model.tig00001355.7 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
Cre16.g654500 No alias Protein biosynthesis.translation... 0.08 Archaeplastida
Gb_36251 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.07 Archaeplastida
Mp5g18020.1 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.18 Archaeplastida
Pp3c11_20930V3.1 No alias eukaryotic translation initiation factor 2 0.1 Archaeplastida
Pp3c7_5560V3.1 No alias eukaryotic translation initiation factor 2 0.04 Archaeplastida
Smo79764 No alias Protein biosynthesis.translation... 0.05 Archaeplastida
Solyc05g052690.4.1 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.02 Archaeplastida
Solyc11g013440.2.1 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.1 Archaeplastida
Zm00001e027674_P001 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Zm00001e029699_P001 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.15 Archaeplastida
AMTR_s00077p00121720 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.07 LandPlants
AT2G39990 EIF2, AteIF3f, eIF3F eukaryotic translation initiation factor 2 0.04 LandPlants
Gb_36251 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.06 LandPlants
Mp5g18020.1 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.18 LandPlants
Pp3c11_20930V3.1 No alias eukaryotic translation initiation factor 2 0.1 LandPlants
Pp3c7_5560V3.1 No alias eukaryotic translation initiation factor 2 0.03 LandPlants
Smo79764 No alias Protein biosynthesis.translation... 0.05 LandPlants
Solyc05g052690.4.1 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.02 LandPlants
Solyc11g013440.2.1 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.1 LandPlants
Zm00001e027674_P001 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.04 LandPlants
Zm00001e029699_P001 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.15 LandPlants
AMTR_s00077p00121720 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.07 SeedPlants
AT2G39990 EIF2, AteIF3f, eIF3F eukaryotic translation initiation factor 2 0.04 SeedPlants
Gb_36251 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.06 SeedPlants
Solyc05g052690.4.1 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.02 SeedPlants
Solyc11g013440.2.1 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.1 SeedPlants
Zm00001e027674_P001 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 16 123
IPR024969 Rpn11/EIF3F_C 171 277
No external refs found!