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  5. Cre12.g503400

Cre12.g503400


Description : Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana


Gene families : OG0004863 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004863_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g503400

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00144250 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g14204 No alias splicing factor *(PRP38) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G099000.1 Ceric.13G099000 splicing factor *(PRP38) & original description:... 0.03 OrthoFinder output from all 47 species
Gb_10968 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g01630.1 LOC_Os09g01630 Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp4g12850.1 No alias Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc01g100060.4.1 Solyc01g100060 Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g11595 No alias splicing factor *(PRP38) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009450_P001 Zm00001e009450 Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005037 PRP38 10 173
No external refs found!