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  5. Cre12.g491150

Cre12.g491150


Description : Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana


Gene families : OG0002136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g491150
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00119530 evm_27.TU.AmTr_v1... Vacuolar protein sorting-associated protein 55 homolog... 0.02 OrthoFinder output from all 47 species
Adi_g047016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g00350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0873.g090701 No alias not classified & original description: CDS=6-269 0.03 OrthoFinder output from all 47 species
Ceric.04G011500.1 Ceric.04G011500 not classified & original description: pacid=50630507... 0.02 OrthoFinder output from all 47 species
Ceric.18G065600.1 Ceric.18G065600 not classified & original description: pacid=50622147... 0.02 OrthoFinder output from all 47 species
Lfl_g32762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g23290.1 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.02 OrthoFinder output from all 47 species
Ore_g27722 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc09g010170.3.1 Solyc09g010170 Vacuolar protein sorting-associated protein 55 homolog... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR007262 Vps55/LEPROT 9 127
No external refs found!