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Aliases : ATUPF3, UPF3
Description : RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF3 component
Gene families : OG0002175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002175_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00071p00188270 | ATUPF3, UPF3,... | RNA processing.RNA quality control Exon Junction complex... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g11732 | ATUPF3, UPF3 | component *(UPF3) of RNA quality control Exon Junction... | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g05619 | ATUPF3, UPF3 | component *(UPF3) of RNA quality control Exon Junction... | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011480 | ATUPF3, UPF3 | component *(UPF3) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g38478 | ATUPF3, UPF3 | component *(UPF3) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.34G019900.1 | ATUPF3, UPF3,... | component *(UPF3) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g15359 | ATUPF3, UPF3 | component *(UPF3) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04069 | ATUPF3, UPF3 | component *(UPF3) of RNA quality control Exon Junction... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g04941 | ATUPF3, UPF3 | component *(UPF3) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g05590.1 | ATUPF3, UPF3 | component UPF3 of RNA quality control Exon Junction complex | 0.01 | OrthoFinder output from all 47 species | |
| Solyc10g044450.3.1 | ATUPF3, UPF3,... | component UPF3 of RNA quality control Exon Junction complex | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12324 | ATUPF3, UPF3 | component *(UPF3) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| CC | GO:0035658 | Mon1-Ccz1 complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005120 | UPF3_dom | 6 | 129 |
| No external refs found! |