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  5. Cre12.g486250

Cre12.g486250 (ARFA1E, ATARFA1E)


Aliases : ARFA1E, ATARFA1E

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g486250
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT1G10630 ATARFA1F, ARFA1F ADP-ribosylation factor A1F 0.02 OrthoFinder output from all 47 species
AT2G15310 ATARFB1A, ARFB1A ADP-ribosylation factor B1A 0.01 OrthoFinder output from all 47 species
AT2G47170 ARF1A1C Ras-related small GTP-binding family protein 0.03 OrthoFinder output from all 47 species
AT3G03120 ATARFB1C, ARFB1C ADP-ribosylation factor B1C 0.01 OrthoFinder output from all 47 species
Adi_g051592 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g07015 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19871 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0170.g055577 No alias not classified & original description: CDS=1-285 0.02 OrthoFinder output from all 47 species
Azfi_s1372.g102367 No alias not classified & original description: CDS=1-285 0.02 OrthoFinder output from all 47 species
Cba_g06881 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.25G015600.1 ATARFA1B,... ARF-GTPase *(ARF1) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.129 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Ehy_g04151 ARFA1E, ATARFA1E ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07364 ARF1A1C ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17402 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01013765001 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
GSVIVT01017654001 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
LOC_Os07g12200.1 ARF1A1C, LOC_Os07g12200 ARF-GTPase 0.02 OrthoFinder output from all 47 species
Lfl_g22222 ATARF1, ARF1,... ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28928 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g31478 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
MA_24477g0010 ATARFA1F, ARFA1F ARF-GTPase 0.02 OrthoFinder output from all 47 species
MA_4349g0020 ATARFA1F, ARFA1F ARF-GTPase 0.01 OrthoFinder output from all 47 species
Mp8g07320.1 ATARFB1C, ARFB1C ARF-GTPase 0.03 OrthoFinder output from all 47 species
Msp_g28749 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g15523 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g26501 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g09167 No alias ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g008000.3.1 ATARFA1B,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
Spa_g49716 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g49718 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g51173 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03151 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e011790_P001 ATARFA1B,... ARF-GTPase 0.04 OrthoFinder output from all 47 species
Zm00001e025541_P003 ATARFA1F,... ARF-GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 177
No external refs found!