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  5. Cre11.g480950

Cre11.g480950 (ATHMG, HMG, SSRP1, NFD)


Aliases : ATHMG, HMG, SSRP1, NFD

No description available


Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre11.g480950

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00061870 evm_27.TU.AmTr_v1... High mobility group B protein 14 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00240750 NFD03, HMGB3,... High mobility group B protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aspi01Gene17874.t1 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Cba_g24481 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Ceric.05G057900.1 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species
Ceric.37G021800.1 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species
Ehy_g20583 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species
LOC_Os04g47690.1 NFD03, HMGB3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g11004 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Len_g16155 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g24838 ATHMG, HMG, SSRP1, NFD not classified & original description: none 0.01 OrthoFinder output from all 47 species
Mp2g12330.1 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Nbi_g29699 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species
Ppi_g61736 No alias DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020542 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species
Spa_g11610 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species
Spa_g53927 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species
Tin_g44303 NFD4, HMGB4, NFD04 DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 79 146
No external refs found!