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  5. Cre11.g469450

Cre11.g469450 (RPN13)


Aliases : RPN13

Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN13 regulatory component


Gene families : OG0005876 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005876_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre11.g469450
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT2G26590 RPN13 regulatory particle non-ATPase 13 0.04 OrthoFinder output from all 47 species
Adi_g103298 RPN13 regulatory component *(RPN13) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037247 RPN13 regulatory component *(RPN13) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Dcu_g39973 RPN13 regulatory component *(RPN13) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
GSVIVT01032266001 RPN13 Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51640.1 RPN13, LOC_Os05g51640 regulatory component RPN13 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Pp3c21_370V3.1 RPN13, Pp3c21_370 regulatory particle non-ATPase 13 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015566 RPN13 regulatory component *(RPN13) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Sam_g17876 No alias regulatory component *(RPN13) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Sam_g50225 No alias regulatory component *(RPN13) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Solyc07g017400.3.1 RPN13, Solyc07g017400 regulatory component RPN13 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Spa_g45056 RPN13 regulatory component *(RPN13) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Zm00001e032559_P001 RPN13, Zm00001e032559 regulatory component RPN13 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0008521 acetyl-CoA transmembrane transporter activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0071077 adenosine 3',5'-bisphosphate transmembrane transporter activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR032368 RPN13_DEUBAD 223 327
IPR006773 Rpn13/ADRM1 11 95
No external refs found!