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  5. Cre10.g464350

Cre10.g464350


No description available


Gene families : OG0006276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g464350

Target Alias Description ECC score Gene Family Method Actions
AT3G42860 No alias zinc knuckle (CCHC-type) family protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene41631.t1 Aspi01Gene41631 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g14259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g57260.1 LOC_Os03g57260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005917_P001 Zm00001e005917 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 554 569
IPR001878 Znf_CCHC 475 491
IPR001878 Znf_CCHC 427 443
IPR010666 Znf_GRF 197 238
IPR010666 Znf_GRF 350 393
No external refs found!