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Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component
Gene families : OG0000667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000667_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G37720 | ALY4 | ALWAYS EARLY 4 | 0.01 | OrthoFinder output from all 47 species | |
| AT5G59950 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g091928 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04270 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15022 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000194.40 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_04102 | No alias | mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g56770 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.01 | OrthoFinder output from all 47 species | |
| Mp2g07590.1 | No alias | mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g09903 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g07185 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022419_P005 | ALY4, Zm00001e022419 | mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030972_P001 | ALY4, Zm00001e030972 | mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| CC | GO:0030289 | protein phosphatase 4 complex | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1903293 | phosphatase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 175 | 243 |
| No external refs found! |