Cre10.g450100

Description : Cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana

Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre10.g450100

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00270020	evm_27.TU.AmTr_v1...	External stimuli response.temperature.temperature...	0.01	OrthoFinder output from all 47 species
Aop_g22499	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene15683.t1	ATCNGC6, CNGC6,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g77566	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000851.5	ATCNGC9, CNGC9	Putative cyclic nucleotide-gated ion channel 8...	0.03	OrthoFinder output from all 47 species
Dde_g24170	DND1, ATCNGC2, CNGC2	temperature sensor protein *(CNGC2) & original description: none	0.01	OrthoFinder output from all 47 species
Gb_35449	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel (CNGC)	0.01	OrthoFinder output from all 47 species
LOC_Os06g33570.1	ATCNGC1, CNGC1,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
Pir_g29423	ATCNGC1, CNGC1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Pir_g47554	ATCNGC1, CNGC1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g04612	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	2115	2371
IPR000595	cNMP-bd_dom	2469	2552

External Links

No external refs found!