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  5. Cre10.g439600

Cre10.g439600 (RHD3)


Aliases : RHD3

Description : Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana


Gene families : OG0001619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g439600

Target Alias Description ECC score Gene Family Method Actions
Adi_g021765 RHD3 ER tubulae formation factor *(RHD3/RL) & original... 0.04 OrthoFinder output from all 47 species
Adi_g084107 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.03 OrthoFinder output from all 47 species
Aev_g13381 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.02 OrthoFinder output from all 47 species
Ala_g18669 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.01 OrthoFinder output from all 47 species
Aop_g17759 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene23497.t1 Aspi01Gene23497 ER tubulae formation factor *(RHD3/RL) & original... 0.02 OrthoFinder output from all 47 species
Cba_g12043 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.01 OrthoFinder output from all 47 species
Dde_g11228 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01016855001 No alias Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_27309 RHD3 ER tubulae formation factor (RHD3/RL) 0.02 OrthoFinder output from all 47 species
Gb_39091 No alias ER tubulae formation factor (RHD3/RL) 0.02 OrthoFinder output from all 47 species
Gb_41500 No alias ER tubulae formation factor (RHD3/RL) 0.02 OrthoFinder output from all 47 species
Lfl_g04180 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.02 OrthoFinder output from all 47 species
MA_10426996g0020 No alias ER tubulae formation factor (RHD3/RL) 0.02 OrthoFinder output from all 47 species
Pir_g01679 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.01 OrthoFinder output from all 47 species
Tin_g05201 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR008803 RHD3/Sey1 41 598
IPR008803 RHD3/Sey1 668 808
No external refs found!