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  5. Cre10.g425675

Cre10.g425675


No description available


Gene families : OG0005850 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g425675
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT3G14120 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 OrthoFinder output from all 47 species
Adi_g058716 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0200.g057533 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.02 OrthoFinder output from all 47 species
Ceric.34G011000.1 Ceric.34G011000 not classified & original description: pacid=50624097... 0.02 OrthoFinder output from all 47 species
Dcu_g10818 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01016717001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
LOC_Os11g42420.1 LOC_Os11g42420 NUP107 scaffold nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
MA_10437096g0010 No alias NUP107 scaffold nucleoporin of nuclear pore complex 0.01 OrthoFinder output from all 47 species
MA_3175g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_491742g0010 No alias Nuclear pore complex protein NUP107 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g23360.1 No alias NUP107 scaffold nucleoporin of nuclear pore complex 0.01 OrthoFinder output from all 47 species
Ppi_g32299 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.01 OrthoFinder output from all 47 species
Smo182361 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.01 OrthoFinder output from all 47 species
Solyc12g049410.3.1 Solyc12g049410 NUP107 scaffold nucleoporin of nuclear pore complex 0.05 OrthoFinder output from all 47 species
Zm00001e021094_P001 Zm00001e021094 NUP107 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR007252 Nup84/Nup107 77 349
No external refs found!