Cre10.g424400 (PBB1)

Aliases : PBB1

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-2 component

Gene families : OG0004022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004022_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre10.g424400
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
AT3G27430	PBB1	N-terminal nucleophile aminohydrolases (Ntn hydrolases)...	0.03	OrthoFinder output from all 47 species
AT5G40580	PBB2	20S proteasome beta subunit PBB2	0.05	OrthoFinder output from all 47 species
Aev_g27947	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Als_g10450	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Aop_g04145	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
Aop_g24955	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.01	OrthoFinder output from all 47 species
Aspi01Gene09613.t1	PBB2, Aspi01Gene09613	beta-type-2 component *(PBB) of 26S proteasome &...	0.01	OrthoFinder output from all 47 species
Azfi_s0001.g000485	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.09	OrthoFinder output from all 47 species
Cba_g14020	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
Ceric.35G055100.1	PBB1, Ceric.35G055100	beta-type-2 component *(PBB) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Dac_g04547	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.07	OrthoFinder output from all 47 species
Dcu_g02516	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.08	OrthoFinder output from all 47 species
Dde_g05731	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
GSVIVT01000574001	PBB2	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
Gb_35125	PBB2	component beta type-2 of 26S proteasome	0.08	OrthoFinder output from all 47 species
LOC_Os05g09490.1	PBB1, LOC_Os05g09490	component beta type-2 of 26S proteasome	0.18	OrthoFinder output from all 47 species
Len_g01148	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.08	OrthoFinder output from all 47 species
Lfl_g00695	PBB1	beta-type-2 component *(PBB) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
MA_10436996g0010	PBB2	component beta type-2 of 26S proteasome	0.1	OrthoFinder output from all 47 species
Mp1g03530.1	PBB2	component beta type-2 of 26S proteasome	0.15	OrthoFinder output from all 47 species
Msp_g07522	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.1	OrthoFinder output from all 47 species
Nbi_g02753	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
Ore_g11104	PBB1	beta-type-2 component *(PBB) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Pir_g00293	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Ppi_g08876	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008733	PBB2	beta-type-2 component *(PBB) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014801	PBB1	beta-type-2 component *(PBB) of 26S proteasome &...	0.01	OrthoFinder output from all 47 species
Sam_g24099	No alias	beta-type-2 component *(PBB) of 26S proteasome &...	0.01	OrthoFinder output from all 47 species
Smo149251	PBB1	Protein degradation.26S proteasome.20S core...	0.04	OrthoFinder output from all 47 species
Solyc04g024420.3.1	PBB2, Solyc04g024420	component beta type-2 of 26S proteasome	0.01	OrthoFinder output from all 47 species
Solyc05g013820.4.1	PBB1, Solyc05g013820	component beta type-2 of 26S proteasome	0.16	OrthoFinder output from all 47 species
Spa_g16137	PBB1	beta-type-2 component *(PBB) of 26S proteasome &...	0.08	OrthoFinder output from all 47 species
Spa_g16138	PBB1	beta-type-2 component *(PBB) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
Zm00001e029814_P002	PBB1, Zm00001e029814	component beta type-2 of 26S proteasome	0.16	OrthoFinder output from all 47 species
Zm00001e033186_P001	PBB1, Zm00001e033186	component beta type-2 of 26S proteasome	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009894	regulation of catabolic process	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0042176	regulation of protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
CC	GO:1905369	endopeptidase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	32	212

External Links

No external refs found!

Cre10.g424400 (PBB1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation