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  5. Cre09.g415200

Cre09.g415200


No description available


Gene families : OG0006037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g415200
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00118340 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT5G17930 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.09 OrthoFinder output from all 47 species
Aob_g06021 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.10G038400.1 Ceric.10G038400 not classified & original description: pacid=50613129... 0.01 OrthoFinder output from all 47 species
Dcu_g02977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029949001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os05g05450.1 LOC_Os05g05450 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_175841g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g12210.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Pir_g09760 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e040415_P003 Zm00001e040415 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 877 936
No external refs found!