1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre09.g412450

Cre09.g412450 (ATRAD21.3, SYN4)


Aliases : ATRAD21.3, SYN4

Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component


Gene families : OG0001004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001004_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g412450

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00010710 SYN3, ATRAD21.2,... Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species
AT3G59550 SYN3, ATRAD21.2, ATSYN3 Rad21/Rec8-like family protein 0.04 OrthoFinder output from all 47 species
Aop_g21978 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.02 OrthoFinder output from all 47 species
Ceric.35G066500.1 ATRAD21.3, SYN4,... mitotic-specific Kleisin-type component *(SCC1) of... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.44 SYN3, ATRAD21.2, ATSYN3 Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
GSVIVT01032038001 SYN3, ATRAD21.2, ATSYN3 Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Len_g49535 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.01 OrthoFinder output from all 47 species
Msp_g31762 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.01 OrthoFinder output from all 47 species
Nbi_g13988 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
Solyc01g086690.2.1 SYN3, ATRAD21.2,... mitotic-specific Kleisin-type component SCC1 of cohesin... 0.02 OrthoFinder output from all 47 species
Tin_g14232 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048478 replication fork protection IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR006909 Rad21/Rec8_C_eu 1638 1674
IPR006910 Rad21_Rec8_N 1 95
No external refs found!