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  5. Cre09.g404650

Cre09.g404650


Description : Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS51/UNH component


Gene families : OG0003991 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g404650

Target Alias Description ECC score Gene Family Method Actions
Aev_g09966 No alias component *(VPS51/UNH) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Als_g06912 No alias component *(VPS51/UNH) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Als_g19919 No alias component *(VPS51/UNH) of GARP/EARP... 0.05 OrthoFinder output from all 47 species
Aspi01Gene10293.t1 Aspi01Gene10293 component *(VPS51/UNH) of GARP/EARP... 0.01 OrthoFinder output from all 47 species
Aspi01Gene10297.t1 Aspi01Gene10297 component *(VPS51/UNH) of GARP/EARP... 0.01 OrthoFinder output from all 47 species
Cba_g11605 No alias component *(VPS51/UNH) of GARP/EARP... 0.01 OrthoFinder output from all 47 species
Ceric.34G060300.1 Ceric.34G060300 component *(VPS51/UNH) of GARP/EARP... 0.01 OrthoFinder output from all 47 species
Dcu_g16393 No alias component *(VPS51/UNH) of GARP/EARP... 0.04 OrthoFinder output from all 47 species
Dde_g00861 No alias component *(VPS51/UNH) of GARP/EARP... 0.01 OrthoFinder output from all 47 species
GSVIVT01028119001 No alias Vesicle trafficking.target membrane tethering.GARP/EARP... 0.02 OrthoFinder output from all 47 species
Gb_16420 No alias component VPS51/UNH of GARP/EARP... 0.01 OrthoFinder output from all 47 species
LOC_Os03g52770.1 LOC_Os03g52770 component VPS51/UNH of GARP/EARP... 0.04 OrthoFinder output from all 47 species
Lfl_g03317 No alias component *(VPS51/UNH) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Mp6g05400.1 No alias component VPS51/UNH of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Pir_g11809 No alias component *(VPS51/UNH) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Smo178902 No alias Vesicle trafficking.target membrane tethering.GARP/EARP... 0.02 OrthoFinder output from all 47 species
Smo440937 No alias Vesicle trafficking.target membrane tethering.GARP/EARP... 0.02 OrthoFinder output from all 47 species
Solyc06g009650.3.1 Solyc06g009650 component VPS51/UNH of GARP/EARP... 0.06 OrthoFinder output from all 47 species
Spa_g06241 No alias component *(VPS51/UNH) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Zm00001e012075_P003 Zm00001e012075 component VPS51/UNH of GARP/EARP... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA

No InterPro domains available for this sequence

No external refs found!