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  5. Cre09.g400738

Cre09.g400738


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g400738
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT2G02960 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G38070 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g013103 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g125698 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01768 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00910 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05081 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.03G099300.1 Ceric.03G099300 E3 ubiquitin ligase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.16G007100.1 Ceric.16G007100 E3 ubiquitin ligase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.39G041400.1 Ceric.39G041400 E3 ubiquitin ligase & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01008001001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_09261 No alias RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g03100.1 LOC_Os01g03100 RING-v-class E3 ligase 0.01 OrthoFinder output from all 47 species
LOC_Os11g38800.1 LOC_Os11g38800 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp8g15410.1 No alias RING-v-class E3 ligase 0.01 OrthoFinder output from all 47 species
Nbi_g09086 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16331 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02753 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60879 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000908 No alias E3 ubiquitin ligase & original description: CDS=1-1032 0.03 OrthoFinder output from all 47 species
Sam_g28055 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g010880.3.1 Solyc01g010880 RING-v-class E3 ligase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 38 83
No external refs found!