Cre09.g400650 (EMB3010, RPS6B)


Aliases : EMB3010, RPS6B

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS6 component


Gene families : OG0001926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001926_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g400650
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00238890 RPS6A, RPS6,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder output from all 47 species
AMTR_s00048p00058600 RPS6A, RPS6,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00035710 RPS6A, RPS6,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 OrthoFinder output from all 47 species
AT4G31700 RPS6A, RPS6 ribosomal protein S6 0.21 OrthoFinder output from all 47 species
AT5G10360 EMB3010, RPS6B Ribosomal protein S6e 0.26 OrthoFinder output from all 47 species
Adi_g113028 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aev_g13323 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ala_g27846 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Ala_g39017 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Als_g11616 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Als_g51192 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aob_g03931 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Aop_g06817 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.12 OrthoFinder output from all 47 species
Aop_g08708 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Aop_g54144 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Aspi01Gene03442.t1 EMB3010, RPS6B,... component *(eS6) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0114.g046096 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0350.g066542 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cba_g06428 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cba_g10524 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cba_g10525 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Cba_g63446 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ceric.16G007200.1 EMB3010, RPS6B,... component *(eS6) of small ribosomal-subunit (SSU)... 0.26 OrthoFinder output from all 47 species
Ceric.32G000200.1 EMB3010, RPS6B,... component *(eS6) of small ribosomal-subunit (SSU)... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.73 EMB3010, RPS6B Protein biosynthesis.cytosolic ribosome.small subunit... 0.2 OrthoFinder output from all 47 species
Dac_g12343 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.11 OrthoFinder output from all 47 species
Dac_g32094 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.14 OrthoFinder output from all 47 species
Dcu_g12801 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.1 OrthoFinder output from all 47 species
Dcu_g34811 RPS6A, RPS6 component *(eS6) of small ribosomal-subunit (SSU)... 0.16 OrthoFinder output from all 47 species
Dde_g07539 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Dde_g25782 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g09718 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01009072001 EMB3010, RPS6B Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder output from all 47 species
Gb_13281 EMB3010, RPS6B component RPS6 of SSU proteome 0.14 OrthoFinder output from all 47 species
Gb_36985 EMB3010, RPS6B component RPS6 of SSU proteome 0.13 OrthoFinder output from all 47 species
LOC_Os03g27260.1 EMB3010, RPS6B,... component RPS6 of SSU proteome 0.17 OrthoFinder output from all 47 species
LOC_Os07g42950.1 EMB3010, RPS6B,... component RPS6 of SSU proteome 0.23 OrthoFinder output from all 47 species
Len_g12022 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g04515 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Lfl_g25069 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_10426804g0010 RPS6A, RPS6 component RPS6 of SSU proteome 0.12 OrthoFinder output from all 47 species
MA_72828g0010 EMB3010, RPS6B component RPS6 of SSU proteome 0.16 OrthoFinder output from all 47 species
Mp4g01750.1 EMB3010, RPS6B component RPS6 of SSU proteome 0.26 OrthoFinder output from all 47 species
Msp_g35124 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Msp_g39312 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Nbi_g02736 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Nbi_g19907 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Nbi_g30955 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Nbi_g37229 RPS6A, RPS6 component *(eS6) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ore_g05921 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ore_g26609 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Pp3c15_25430V3.1 EMB3010, RPS6B,... Ribosomal protein S6e 0.11 OrthoFinder output from all 47 species
Pp3c15_25780V3.1 EMB3010, RPS6B,... Ribosomal protein S6e 0.1 OrthoFinder output from all 47 species
Ppi_g09534 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Sam_g19004 No alias component *(eS6) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g19005 No alias component *(eS6) of small ribosomal-subunit (SSU)... 0.14 OrthoFinder output from all 47 species
Sam_g25389 No alias component *(eS6) of small ribosomal-subunit (SSU)... 0.11 OrthoFinder output from all 47 species
Smo172795 EMB3010, RPS6B Protein biosynthesis.cytosolic ribosome.small subunit... 0.2 OrthoFinder output from all 47 species
Solyc08g006040.3.1 RPS6A, RPS6,... component RPS6 of SSU proteome 0.08 OrthoFinder output from all 47 species
Solyc08g074240.3.1 RPS6A, RPS6,... component RPS6 of SSU proteome 0.21 OrthoFinder output from all 47 species
Solyc12g096300.2.1 EMB3010, RPS6B,... component RPS6 of SSU proteome 0.18 OrthoFinder output from all 47 species
Spa_g10201 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.17 OrthoFinder output from all 47 species
Spa_g12883 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.1 OrthoFinder output from all 47 species
Spa_g17271 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.13 OrthoFinder output from all 47 species
Tin_g00509 EMB3010, RPS6B component *(eS6) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e010802_P001 EMB3010, RPS6B,... component RPS6 of SSU proteome 0.18 OrthoFinder output from all 47 species
Zm00001e035580_P002 EMB3010, RPS6B,... component RPS6 of SSU proteome 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001377 Ribosomal_S6e 1 128
No external refs found!