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  5. Cre09.g400400

Cre09.g400400


No description available


Gene families : OG0006364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g400400
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT4G12590 No alias Protein of unknown function DUF106, transmembrane 0.08 OrthoFinder output from all 47 species
Adi_g016162 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0064.g035652 No alias not classified & original description: CDS=95-850 0.01 OrthoFinder output from all 47 species
Ceric.10G075500.1 Ceric.10G075500 not classified & original description: pacid=50613374... 0.01 OrthoFinder output from all 47 species
Dcu_g08018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003331001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os09g32220.1 LOC_Os09g32220 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g01850.1 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Ore_g07210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008457 No alias not classified & original description: CDS=59-688 0.02 OrthoFinder output from all 47 species
Sam_g06612 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc05g054100.3.1 Solyc05g054100 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e010090_P001 Zm00001e010090 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002809 EMC3/TMCO1 8 194
No external refs found!