No description available
Gene families : OG0006364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006364_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre09.g400400 | |
Cluster | HCCA: Cluster_12 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G12590 | No alias | Protein of unknown function DUF106, transmembrane | 0.08 | OrthoFinder output from all 47 species | |
Adi_g016162 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0064.g035652 | No alias | not classified & original description: CDS=95-850 | 0.01 | OrthoFinder output from all 47 species | |
Ceric.10G075500.1 | Ceric.10G075500 | not classified & original description: pacid=50613374... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g08018 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01003331001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g32220.1 | LOC_Os09g32220 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Mp1g01850.1 | No alias | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
Ore_g07210 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0021.g008457 | No alias | not classified & original description: CDS=59-688 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g06612 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Solyc05g054100.3.1 | Solyc05g054100 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e010090_P001 | Zm00001e010090 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002809 | EMC3/TMCO1 | 8 | 194 |
No external refs found! |