Cre09.g399289

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre09.g399289

Target	Alias	Description	ECC score	Gene Family Method
Adi_g088745	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g12454	SPL7, ATSPL7	SBP-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g31886	SPL2	SBP-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0093.g043369	SPL7, ATSPL7	SBP-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g24520	SPL3	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Gb_26600	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os02g07780.1	SPL2, LOC_Os02g07780	transcription factor (SBP)	0.01	OrthoFinder output from all 47 species
Len_g40710	SPL8	SBP-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g09441	SPL7, ATSPL7	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_10428252g0010	SPL8	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Spa_g38145	SPL10	SBP-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g48285	SPL8	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000210	BTB/POZ_dom	31	133
IPR004333	SBP_dom	595	668

External Links

No external refs found!