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  5. Cre09.g397697

Cre09.g397697


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL4 component


Gene families : OG0041685 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0041685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g397697
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.53 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025755 Ribos_L4_C_dom 275 349
IPR002136 Ribosomal_L4/L1e 23 262
No external refs found!