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  5. Cre09.g393950

Cre09.g393950


Description : Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g393950

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00108310 VAR2, FTSH2,... Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
AT1G06430 FTSH8 FTSH protease 8 0.03 OrthoFinder output from all 47 species
AT3G02450 No alias cell division protein ftsH, putative 0.01 OrthoFinder output from all 47 species
Adi_g087057 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Adi_g114970 VAR2, FTSH2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02360 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Ala_g04209 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g14174 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Als_g20560 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Aop_g14163 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Aspi01Gene12384.t1 FTSH8, Aspi01Gene12384 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Aspi01Gene55621.t1 Aspi01Gene55621 nucleoside transporter *(ENT) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0022.g016135 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Cba_g13333 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Cba_g75374 VAR2, FTSH2 EXECUTER-cleavage protease *(FtsH2) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G093200.1 FTSH8, Ceric.03G093200 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Ceric.22G054100.1 FTSH8, Ceric.22G054100 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.121 FTSH5, VAR1 ATP-dependent zinc metalloprotease FTSH 5, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dac_g10534 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Dcu_g13134 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Dcu_g44210 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Dde_g23743 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Ehy_g03938 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.01 OrthoFinder output from all 47 species
Gb_12830 FTSH8 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 OrthoFinder output from all 47 species
LOC_Os06g45820.1 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 OrthoFinder output from all 47 species
Len_g21745 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Len_g44862 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Lfl_g04989 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Mp4g19200.1 VAR2, FTSH2 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 OrthoFinder output from all 47 species
Msp_g02086 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Nbi_g11426 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Nbi_g34642 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g26838 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Ore_g45571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09681 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.01 OrthoFinder output from all 47 species
Pir_g14965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17712 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0187.g025114 No alias not classified & original description: CDS=1-1989 0.02 OrthoFinder output from all 47 species
Sam_g18762 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Sam_g37450 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Smo149856 VAR2, FTSH2 Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
Smo152929 FTSH8 Protein degradation.peptidase families.metallopeptidase... 0.01 OrthoFinder output from all 47 species
Solyc07g055320.4.1 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.01 OrthoFinder output from all 47 species
Spa_g04708 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Spa_g25819 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Tin_g04117 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Zm00001e030358_P003 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.05 OrthoFinder output from all 47 species
Zm00001e037753_P001 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 311 440
No external refs found!