1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g56300.1

LOC_Os04g56300.1


Description : component ADA1 of SAGA transcription co-activator complex


Gene families : OG_01_0001266 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001266_tree ,
OG_02_0000955 (LandPlants) Phylogenetic Tree(s): OG_02_0000955_tree ,
OG_03_0004777 (SeedPlants) Phylogenetic Tree(s): OG_03_0004777_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g56300.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.27 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 Archaeplastida
GSVIVT01035521001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
GSVIVT01037861001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
Gb_32111 No alias component ADA1 of SAGA transcription co-activator complex 0.05 Archaeplastida
LOC_Os12g39090.2 No alias component ADA1 of SAGA transcription co-activator complex 0.05 Archaeplastida
MA_7243g0030 No alias component ADA1 of SAGA transcription co-activator complex 0.02 Archaeplastida
Mp5g08050.1 No alias component ADA1 of SAGA transcription co-activator complex 0.01 Archaeplastida
Pp3c3_34380V3.1 No alias No annotation 0.02 Archaeplastida
Solyc01g107210.4.1 No alias component ADA1 of SAGA transcription co-activator complex 0.03 Archaeplastida
Solyc06g068610.3.1 No alias component ADA1 of SAGA transcription co-activator complex 0.02 Archaeplastida
Zm00001e006681_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.03 Archaeplastida
Zm00001e041823_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.02 Archaeplastida
GSVIVT01035521001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 LandPlants
GSVIVT01037861001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 LandPlants
MA_7243g0030 No alias component ADA1 of SAGA transcription co-activator complex 0.02 LandPlants
Mp5g08050.1 No alias component ADA1 of SAGA transcription co-activator complex 0.01 LandPlants
Pp3c3_34380V3.1 No alias No annotation 0.02 LandPlants
Solyc01g107210.4.1 No alias component ADA1 of SAGA transcription co-activator complex 0.03 LandPlants
Solyc06g068610.3.1 No alias component ADA1 of SAGA transcription co-activator complex 0.02 LandPlants
Zm00001e006681_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.03 LandPlants
Zm00001e041823_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.02 LandPlants
GSVIVT01035521001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 SeedPlants
Solyc06g068610.3.1 No alias component ADA1 of SAGA transcription co-activator complex 0.02 SeedPlants
Zm00001e006681_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.03 SeedPlants
Zm00001e041823_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 32 338
No external refs found!