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  5. Cre08.g386000

Cre08.g386000


No description available


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g386000

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00050160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.01 OrthoFinder output from all 47 species
Aev_g08216 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.01 OrthoFinder output from all 47 species
Als_g23025 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23026 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g10962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13559 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene15069.t1 Aspi01Gene15069 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene19628.t1 Aspi01Gene19628 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene33471.t1 Aspi01Gene33471 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene53152.t1 Aspi01Gene53152 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53154.t1 Aspi01Gene53154 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010269 No alias not classified & original description: CDS=1215-6422 0.01 OrthoFinder output from all 47 species
Cba_g31776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G075300.1 Ceric.04G075300 not classified & original description: pacid=50631416... 0.02 OrthoFinder output from all 47 species
Ceric.19G070400.1 Ceric.19G070400 not classified & original description: pacid=50576012... 0.01 OrthoFinder output from all 47 species
Dcu_g09002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.01 OrthoFinder output from all 47 species
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
Gb_41247 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.01 OrthoFinder output from all 47 species
LOC_Os03g53630.1 LOC_Os03g53630 PHD finger transcription factor 0.01 OrthoFinder output from all 47 species
LOC_Os04g59510.1 LOC_Os04g59510 PHD finger transcription factor 0.01 OrthoFinder output from all 47 species
LOC_Os07g07690.1 LOC_Os07g07690 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g12071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02467 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g06765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12951 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_139275g0010 No alias PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.03 OrthoFinder output from all 47 species
Nbi_g13686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.03 OrthoFinder output from all 47 species
Pir_g06867 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g16242 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g18645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08147 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g08484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004313 No alias not classified & original description: CDS=588-5219 0.02 OrthoFinder output from all 47 species
Sam_g15944 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc09g076010.3.1 Solyc09g076010 PHD finger transcription factor 0.01 OrthoFinder output from all 47 species
Spa_g50990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005667_P001 Zm00001e005667 PHD finger transcription factor 0.01 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e032904_P002 Zm00001e032904 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e042012_P001 Zm00001e042012 component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 178 271
No external refs found!