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  5. Cre08.g384864

Cre08.g384864


No description available


Gene families : OG0004200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g384864

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00228240 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 OrthoFinder output from all 47 species
AT2G07360 No alias SH3 domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g012263 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Aev_g03405 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Ala_g04411 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Als_g06409 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Aob_g04488 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Aop_g10874 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene43034.t1 Aspi01Gene43034 component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014845 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Cba_g01323 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.01 OrthoFinder output from all 47 species
Ceric.19G017700.1 Ceric.19G017700 component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Dcu_g10947 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01022289001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 OrthoFinder output from all 47 species
Gb_19640 No alias component TASH3 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
LOC_Os03g15900.2 LOC_Os03g15900 component TASH3 of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Len_g00758 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g10824 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.06 OrthoFinder output from all 47 species
MA_10436368g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10437142g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_204345g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_41116g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g09190.1 No alias component TASH3 of TPLATE AP-2 co-adaptor complex 0.09 OrthoFinder output from all 47 species
Nbi_g02456 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Ore_g20423 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Pir_g19886 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Pnu_g08798 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.01 OrthoFinder output from all 47 species
Sam_g16007 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Solyc05g025750.3.1 Solyc05g025750 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g02184 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e001169_P001 Zm00001e001169 component TASH3 of TPLATE AP-2 co-adaptor complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001452 SH3_domain 1479 1527
IPR001452 SH3_domain 1146 1195
No external refs found!