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  5. Cre08.g375084

Cre08.g375084


No description available


Gene families : OG0002875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g375084
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Als_g56861 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g17534 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01020233001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Pir_g11390 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g09240 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g16365 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g005620.4.1 Solyc05g005620 pre-mRNA splicing factor (RBM25) 0.02 OrthoFinder output from all 47 species
Spa_g40329 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g18982 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR002483 PWI_dom 689 755
IPR000504 RRM_dom 91 160
No external refs found!