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  5. Cre08.g360500

Cre08.g360500


Description : CSC1-like protein At1g62320 OS=Arabidopsis thaliana


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g360500
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.02 OrthoFinder output from all 47 species
AT3G01100 HYP1, ATHYP1 hypothetical protein 1 0.02 OrthoFinder output from all 47 species
AT3G21620 No alias ERD (early-responsive to dehydration stress) family protein 0.02 OrthoFinder output from all 47 species
AT4G22120 No alias ERD (early-responsive to dehydration stress) family protein 0.01 OrthoFinder output from all 47 species
Adi_g009972 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g017299 No alias calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g16435 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene21987.t1 HYP1, ATHYP1,... calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0373.g067190 ERD4 calcium-permeable channel *(OSCA) & original... 0.02 OrthoFinder output from all 47 species
Ceric.10G046800.1 ERD4, Ceric.10G046800 calcium-permeable channel *(OSCA) & original... 0.03 OrthoFinder output from all 47 species
Dac_g14294 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g19010 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g00911 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000831001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.01 OrthoFinder output from all 47 species
GSVIVT01011543001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.01 OrthoFinder output from all 47 species
Gb_08557 ERD4 calcium-permeable channel (OSCA) 0.01 OrthoFinder output from all 47 species
Gb_11287 No alias calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
LOC_Os03g51620.1 RXW8, LOC_Os03g51620 calcium-permeable channel (OSCA) 0.01 OrthoFinder output from all 47 species
LOC_Os05g51630.1 LOC_Os05g51630 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
LOC_Os10g42820.1 LOC_Os10g42820 calcium-permeable channel (OSCA) 0.01 OrthoFinder output from all 47 species
LOC_Os12g39320.1 HYP1, ATHYP1,... calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Len_g09807 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g07790 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14172 ERD4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g20113 ERD4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20127 No alias calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g17063 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g33237 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g03204 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo41460 ERD4 Solute transport.channels.OSCA calcium-permeable channel 0.01 OrthoFinder output from all 47 species
Solyc08g076310.3.1 Solyc08g076310 calcium-permeable channel (OSCA) 0.01 OrthoFinder output from all 47 species
Spa_g11165 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e003059_P001 HYP1, ATHYP1,... calcium-permeable channel (OSCA) 0.01 OrthoFinder output from all 47 species
Zm00001e012117_P001 RXW8, Zm00001e012117 calcium-permeable channel (OSCA) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR027815 CSC1/OSCA1-like_cyt 631 764
IPR032880 Csc1/OSCA1-like_N 243 289
IPR032880 Csc1/OSCA1-like_N 8 134
IPR003864 CSC1/OSCA1-like_7TM 789 1054
No external refs found!