LOC_Os04g55230.1


Description : Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 1250.0)


Gene families : OG_01_0003177 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003177_tree ,
OG_02_0002275 (LandPlants) Phylogenetic Tree(s): OG_02_0002275_tree ,
OG_03_0002087 (SeedPlants) Phylogenetic Tree(s): OG_03_0002087_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g55230.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00021p00245460 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G01320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT1G15290 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
GSVIVT01017381001 No alias Protein TSS OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.1 Archaeplastida
GSVIVT01027120001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_14168 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 Archaeplastida
Gb_20705 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 439.0) 0.02 Archaeplastida
Gb_20706 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 386.0) 0.02 Archaeplastida
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 Archaeplastida
Pp3c24_6750V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Pp3c8_14980V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.06 Archaeplastida
Solyc06g068230.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 Archaeplastida
Solyc07g006030.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 Archaeplastida
Zm00001e006762_P001 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.06 Archaeplastida
Zm00001e016102_P002 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 Archaeplastida
Zm00001e041774_P003 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 Archaeplastida
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.04 LandPlants
AMTR_s00021p00245460 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.03 LandPlants
AT1G15290 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
GSVIVT01017381001 No alias Protein TSS OS=Arabidopsis thaliana 0.04 LandPlants
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.09 LandPlants
Gb_14168 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 LandPlants
Gb_20705 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 439.0) 0.02 LandPlants
Gb_20706 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 386.0) 0.02 LandPlants
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 LandPlants
Pp3c24_6750V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
Pp3c8_14980V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.03 LandPlants
Smo442478 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 LandPlants
Solyc06g068230.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 LandPlants
Solyc07g006030.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 LandPlants
Zm00001e006762_P001 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.06 LandPlants
Zm00001e016102_P002 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 LandPlants
Zm00001e041774_P003 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 LandPlants
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.04 SeedPlants
AMTR_s00021p00245460 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.03 SeedPlants
AT1G15290 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 SeedPlants
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 SeedPlants
GSVIVT01017381001 No alias Protein TSS OS=Arabidopsis thaliana 0.04 SeedPlants
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.08 SeedPlants
Gb_14168 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 SeedPlants
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 SeedPlants
Solyc06g068230.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 SeedPlants
Solyc07g006030.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 SeedPlants
Zm00001e006762_P001 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.06 SeedPlants
Zm00001e016102_P002 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 SeedPlants
Zm00001e041774_P003 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033646 CLU-central 719 862
IPR028275 CLU_N 53 124
No external refs found!