Cre07.g356350 (CLA, DXS, CLA1, DEF, DXPS2)

Aliases : CLA, DXS, CLA1, DEF, DXPS2

Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.DXS 1-deoxy-D-xylulose 5-phosphate synthase

Gene families : OG0001325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001325_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre07.g356350
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
AT4G15560	CLA, DXS, CLA1,...	Deoxyxylulose-5-phosphate synthase	0.07	OrthoFinder output from all 47 species
Adi_g002037	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Aob_g06658	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Aop_g04601	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.01	OrthoFinder output from all 47 species
Cba_g20839	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.04	OrthoFinder output from all 47 species
Ceric.28G050500.1	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.05	OrthoFinder output from all 47 species
Gb_25257	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.04	OrthoFinder output from all 47 species
Lfl_g07086	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species
MA_10426889g0010	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.03	OrthoFinder output from all 47 species
MA_140902g0010	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.02	OrthoFinder output from all 47 species
Mp2g09130.1	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.08	OrthoFinder output from all 47 species
Nbi_g08983	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species
Ore_g27687	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species
Ore_g43427	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Pnu_g06761	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species
Ppi_g02273	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species
Sam_g07986	No alias	EC_2.2 transferase transferring aldehyde or ketonic...	0.01	OrthoFinder output from all 47 species
Smo268187	CLA, DXS, CLA1,...	Secondary metabolism.terpenoids.methylerythritol...	0.03	OrthoFinder output from all 47 species
Solyc11g010850.2.1	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.01	OrthoFinder output from all 47 species
Spa_g49020	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.01	OrthoFinder output from all 47 species
Tin_g19065	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species
Zm00001e031654_P001	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016744	transketolase or transaldolase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008883	glutamyl-tRNA reductase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0016851	magnesium chelatase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	HCCA
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005475	Transketolase-like_Pyr-bd	403	565
IPR033248	Transketolase_C	588	711
IPR005477	Dxylulose-5-P_synthase	82	367

External Links

No external refs found!

Cre07.g356350 (CLA, DXS, CLA1, DEF, DXPS2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation