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  5. Cre07.g348850

Cre07.g348850 (RPL2.1)


Aliases : RPL2.1

Description : 50S ribosomal protein L2, chloroplastic OS=Chara vulgaris


Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g348850

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00011090 RPL2.1,... 50S ribosomal protein L2, chloroplastic OS=Amborella trichopoda 0.01 OrthoFinder output from all 47 species
ATCG00830 RPL2.1 ribosomal protein L2 0.05 OrthoFinder output from all 47 species
ATCG01310 RPL2.2 ribosomal protein L2 0.05 OrthoFinder output from all 47 species
Aev_g14432 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aev_g24286 No alias component *(uL2m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ala_g38158 No alias component *(uL2m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aop_g61267 No alias component *(uL2m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cba_g03784 No alias component *(uL2m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Cba_g04596 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.05G042700.1 RPL2.1, Ceric.05G042700 not classified & original description: pacid=50577724... 0.03 OrthoFinder output from all 47 species
Ceric.1Z164200.1 RPL2.1, Ceric.1Z164200 not classified & original description: pacid=50596959... 0.04 OrthoFinder output from all 47 species
Ceric.25G023800.1 Ceric.25G023800 not classified & original description: pacid=50593099... 0.01 OrthoFinder output from all 47 species
Ceric.38G009500.1 RPL2.1, Ceric.38G009500 not classified & original description: pacid=50580350... 0.01 OrthoFinder output from all 47 species
Ceric.38G057600.1 Ceric.38G057600 not classified & original description: pacid=50579815... 0.04 OrthoFinder output from all 47 species
Dde_g06655 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Dde_g21793 RPL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08274 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Lfl_g13189 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Mp1g19370.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g39693 No alias component *(uL2m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ore_g43250 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g37334 No alias component *(uL2m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c2_23491V3.1 Pp3c2_23491 Ribosomal protein L2 family 0.01 OrthoFinder output from all 47 species
Smo137825 RPL2.1 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Solyc00g500036.1.1 RPL2.1, Solyc00g500036 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.01 OrthoFinder output from all 47 species
Solyc00g500080.1.1 RPL2.1, Solyc00g500080 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.01 OrthoFinder output from all 47 species
Solyc00g500298.1.1 RPL2.1, Solyc00g500298 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 115 195
IPR022669 Ribosomal_L2_C 203 325
No external refs found!