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  5. Cre07.g331900

Cre07.g331900 (ATRPS13A, RPS13, PFL2, RPS13A)


Aliases : ATRPS13A, RPS13, PFL2, RPS13A

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS13 component


Gene families : OG0068012 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0068012_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g331900
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Dde_g32193 No alias component *(uS15) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR012606 Ribosomal_S13/S15_N 1 60
IPR000589 Ribosomal_S15 79 146
No external refs found!