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  5. Cre07.g324600

Cre07.g324600


Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP2S small sigma subunit


Gene families : OG0006811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g324600
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00057620 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Als_g01286 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Aop_g41486 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene70128.t1 Aspi01Gene70128 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0024.g020463 No alias not classified & original description: CDS=110-682 0.03 OrthoFinder output from all 47 species
Ceric.12G036900.1 Ceric.12G036900 small subunit sigma of AP-2 cargo adaptor complex &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.8 No alias AP-2 complex subunit sigma OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dde_g20827 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.01 OrthoFinder output from all 47 species
Ehy_g23113 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009900001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Gb_05592 No alias small subunit sigma of AP-2 cargo adaptor complex 0.01 OrthoFinder output from all 47 species
LOC_Os12g10560.1 LOC_Os12g10560 small subunit sigma of AP-2 cargo adaptor complex 0.07 OrthoFinder output from all 47 species
Lfl_g05906 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.05 OrthoFinder output from all 47 species
Mp1g19570.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.05 OrthoFinder output from all 47 species
Msp_g00129 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g16379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c9_6760V3.1 Pp3c9_6760 SNARE-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g01569 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022259 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Sam_g14800 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Sam_g28103 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.01 OrthoFinder output from all 47 species
Smo271913 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 OrthoFinder output from all 47 species
Solyc04g081410.3.1 Solyc04g081410 small subunit sigma of AP-2 cargo adaptor complex 0.04 OrthoFinder output from all 47 species
Spa_g40107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g25488 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e011050_P001 Zm00001e011050 small subunit sigma of AP-2 cargo adaptor complex 0.04 OrthoFinder output from all 47 species
Zm00001e018362_P003 Zm00001e018362 small subunit sigma of AP-2 cargo adaptor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 141
No external refs found!