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No description available
Gene families : OG0004742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004742_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre07.g324000 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00041p00138020 | SAR1, ATNUP160,... | Protein translocation.nucleus.nucleocytoplasmic... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G33410 | SAR1, ATNUP160, NUP160 | SUPPRESSOR OF AUXIN RESISTANCE1 | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g48633 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g07840 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g01978 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07555 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.32G022400.1 | SAR1, ATNUP160,... | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000691.37 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g09122 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04055 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015912001 | SAR1, ATNUP160, NUP160 | Protein translocation.nucleus.nucleocytoplasmic... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_36285 | SAR1, ATNUP160, NUP160 | NUP160 scaffold nucleoporin of nuclear pore complex | 0.01 | OrthoFinder output from all 47 species | |
| Gb_36286 | SAR1, ATNUP160, NUP160 | NUP160 scaffold nucleoporin of nuclear pore complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g04970.1 | SAR1, ATNUP160,... | NUP160 scaffold nucleoporin of nuclear pore complex | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g11272 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10430989g0010 | SAR1, ATNUP160, NUP160 | Nuclear pore complex protein NUP160 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10436566g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_33415g0010 | SAR1, ATNUP160, NUP160 | NUP160 scaffold nucleoporin of nuclear pore complex | 0.04 | OrthoFinder output from all 47 species | |
| MA_7737080g0010 | SAR1, ATNUP160, NUP160 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g11350.1 | SAR1, ATNUP160, NUP160 | NUP160 scaffold nucleoporin of nuclear pore complex | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g14433 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16665 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g04204 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g26282 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g16275 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo445056 | SAR1, ATNUP160, NUP160 | Protein translocation.nucleus.nucleocytoplasmic... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc01g102540.3.1 | SAR1, ATNUP160,... | NUP160 scaffold nucleoporin of nuclear pore complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07635 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g09156 | SAR1, ATNUP160, NUP160 | scaffold nucleoporin of nuclear pore complex *(NUP160) &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013640_P002 | SAR1, ATNUP160,... | NUP160 scaffold nucleoporin of nuclear pore complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |