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  5. Cre07.g317050

Cre07.g317050


Description : Polyubiquitin (Fragment) OS=Acetabularia peniculus


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g317050

Target Alias Description ECC score Gene Family Method Actions
AT1G31340 RUB1, ATRUB1, NEDD8 related to ubiquitin 1 0.01 OrthoFinder output from all 47 species
AT4G05320 UBQ10 polyubiquitin 10 0.02 OrthoFinder output from all 47 species
Adi_g052036 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Als_g21598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27260.t1 UBQ10, Aspi01Gene27260 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54404.t1 UBQ11, Aspi01Gene54404 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene54416.t1 UBQ11, Aspi01Gene54416 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os01g45420.1 RUB1, ATRUB1,... Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza... 0.01 OrthoFinder output from all 47 species
Pir_g02121 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07156 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19042 No alias UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g005610.4.1 Solyc03g005610 Polyubiquitin (Fragment) OS=Acetabularia peniculus... 0.02 OrthoFinder output from all 47 species
Tin_g05310 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 320 390
No external refs found!