Cre06.g310700

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL36a component

Gene families : OG0000063 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre06.g310700
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
Adi_g128144	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Aev_g36179	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Als_g43628	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Aop_g14796	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Cba_g53547	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Cpa\|evm.model.tig00000489.11	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 39 species
Dcu_g24169	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Dcu_g43546	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Len_g49418	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Msp_g18476	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Ppi_g10159	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Ppi_g54384	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Sam_g27214	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Spa_g02781	No alias	component *(eL42) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Zm00001e035123_P001	Zm00001e035123	component RPL36a of LSU proteome component	0.03	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	HCCA
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
CC	GO:0030964	NADH dehydrogenase complex	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0045271	respiratory chain complex I	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000552	Ribosomal_L44e	17	91

External Links

No external refs found!

Cre06.g310700

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation