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  5. Cre06.g305200

Cre06.g305200


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0002334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g305200

Target Alias Description ECC score Gene Family Method Actions
Aob_g30003 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Aop_g22046 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Aspi01Gene15573.t1 SUF4, Aspi01Gene15573 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Cba_g25906 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Ceric.18G072400.1 SUF4, Ceric.18G072400 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Ceric.31G034100.1 SUF4, Ceric.31G034100 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Ehy_g19813 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.01 OrthoFinder output from all 47 species
Gb_38566 SUF4 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g38790.1 SUF4, LOC_Os09g38790 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Lfl_g08159 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
MA_10435270g0010 SUF4 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Mp4g13860.1 SUF4 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Ore_g03322 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.01 OrthoFinder output from all 47 species
Pnu_g31144 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.05 OrthoFinder output from all 47 species
Ppi_g00853 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001057 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Sam_g35817 No alias FLC-binding component *(SUF4) of FRI-C transcription... 0.01 OrthoFinder output from all 47 species
Sam_g36053 No alias FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Solyc02g032120.3.1 SUF4, Solyc02g032120 C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Solyc02g081620.3.1 SUF4, Solyc02g081620 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g16449 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Spa_g43649 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.01 OrthoFinder output from all 47 species
Zm00001e010342_P005 SUF4, Zm00001e010342 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!