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  5. Cre06.g299300

Cre06.g299300 (TUBG1)


Aliases : TUBG1

Description : Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).TUG1 gamma tubulin component


Gene families : OG0003561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g299300

Target Alias Description ECC score Gene Family Method Actions
AT3G61650 TUBG1 gamma-tubulin 0.05 OrthoFinder output from all 47 species
Aop_g07894 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007580 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.121 TUBG1 Tubulin gamma chain OS=Physcomitrella patens subsp. patens 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.122 TUBG2, ATGCP2, GCP2 Tubulin gamma chain OS=Physcomitrella patens subsp. patens 0.1 OrthoFinder output from all 47 species
LOC_Os05g06450.1 TUBG1, LOC_Os05g06450 gamma tubulin component TUG1 of gamma-Tubulin ring... 0.03 OrthoFinder output from all 47 species
Mp7g00700.1 TUBG1 gamma tubulin component TUG1 of gamma-Tubulin ring... 0.08 OrthoFinder output from all 47 species
Solyc03g111380.3.1 TUBG1, Solyc03g111380 gamma tubulin component TUG1 of gamma-Tubulin ring... 0.03 OrthoFinder output from all 47 species
Tin_g00984 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 4 214
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 264 398
No external refs found!